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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs151144580 chr1:26835674 C/T TFDP3 chrX:132350697-132352376:- 1.04 10.63 1.2E-14 Box Plot
ACC rs151176268 chr2:16873052 C/CA TFDP3 chrX:132350697-132352376:- 1.08 8.56 1.68E-11 Box Plot
ACC rs151306730 chr3:116067894 CCT/C OR6C3 chr12:55725485-55726420:+ 1.05 8.34 3.71E-11 Box Plot
ACC rs1532132 chr1:151954140 A/G EPGN chr4:75174190-75181024:+ 0.99 8.32 4.05E-11 Box Plot
ACC rs1532949 chr4:63721880 T/G GPR128 chr3:100328433-100414323:+ -1.84 -13.33 2.09E-18 Box Plot
ACC rs1558827 chr12:110131866 G/A OR5V1 chr6:29323007-29399744:- 0.56 7.94 1.57E-10 Box Plot
ACC rs1564706 chr2:111792518 G/A PRHOXNB chr13:28552243-28562774:- 0.59 8.27 4.79E-11 Box Plot
ACC rs1569493 chr22:38988344 C/T EPGN chr4:75174190-75181024:+ -1.75 -8.59 1.51E-11 Box Plot
ACC rs1573159 chr1:210982084 C/T C18orf26 chr18:52254988-52266724:+ -0.74 -7.88 1.97E-10 Box Plot
ACC rs159159 chr3:9777158 A/C TMED2 chr12:124069078-124083124:+ 0.55 7.53 7.15E-10 Box Plot
ACC rs162804 chr3:7721215 A/T OR5V1 chr6:29323007-29399744:- 0.58 7.87 2.01E-10 Box Plot
ACC rs1643205 chr2:16883166 A/G TFDP3 chrX:132350697-132352376:- 1.14 9.24 1.48E-12 Box Plot
ACC rs1643206 chr2:16883088 G/A TFDP3 chrX:132350697-132352376:- 1.14 9.24 1.48E-12 Box Plot
ACC rs1643210 chr2:16870237 G/A TFDP3 chrX:132350697-132352376:- 1.08 8.56 1.68E-11 Box Plot
ACC rs1647955 chr11:130908408 A/C PRAMEF6 chr1:12998302-13007406:- 0.5 7.99 1.34E-10 Box Plot